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You can replace that harness with out removing the entire top end. Tricky, pain, but doable. Now if you are going to do a top end refresh anyway? Go for it.
This was a part that I am glad to have pushed Roger and John to get produced.
Like Sean said this part can be replaced without a full top end. You must take the intake "T" over the throttle body off to get to the TPS and the other end of that harness. Getting that "T" back on will be the real challenge though.